Workflow Demos

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Downstream analysis of rpsblast alignment.


alignmentDirAn directory containing all alignment files.
referenceNamerpsblast formatted databases like COG/KOG/PRK.


longTableDetailed table of database hits.
familyCountTableFamily hit count table.
shortTableBrief table of database hits.
classCountTableClass hit count table.


outputPrefixThe prefix of four output files.
programThe command line program to execute.
checkOutputTimestampIf true, verify the last modification timestamp for each output file has increased after execution. If the timestamp has not increased, throw an error.
additionalOptionsAdditional command line options to run
ChoiceThe execution choice to run.