Workflow Demos

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Downstream analysis of alignment against KEGG database.


alignmentDirAn directory containing all alignment output files.


longTableLong table of KEGG hits.
shortTableShort table of KEGG hits.
statisticsTableTable of statistics of KEGG hits.


outputDirThe prefix of the three output files.
programThe command line program to execute.
checkOutputTimestampIf true, verify the last modification timestamp for each output file has increased after execution. If the timestamp has not increased, throw an error.
additionalOptions"-s coord:mask:seq": generate rRNA table, maksed input and rRNA files.
ChoiceThe execution choice to run.