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Orf prediction by fraggene_scan prograrm.


dnaSequenceFileDNA sequence file in FASTA format.


outputPrefixThe prefix of output files.


complete0 if the input data are short sequence reads; 1 if they are complete genome sequences.
trainFile name contaiing model parameters. For example, "illumina_5" is a model for illumina data with 0.5% error rate.
programThe command line program to execute.
checkOutputTimestampIf true, verify the last modification timestamp for each output file has increased after execution. If the timestamp has not increased, throw an error.
additionalOptionsAdditional command line options to run
ChoiceThe execution choice to run.